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glr0890 protein (Gloeobacter violaceus) - STRING interaction network
"glr0890" - ABC transporter permease in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr0890ABC transporter permease (496 aa)    
Predicted Functional Partners:
glr2248
ABC transporter ATP-binding protein (245 aa)
  0.996
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (227 aa)
              0.860
glr2246
Hypothetical protein (165 aa)
 
          0.688
gll2855
MarR family transcriptional regulator (156 aa)
 
     
  0.680
glr1638
Hypothetical protein (343 aa)
 
          0.678
glr3861
MarR family transcriptional regulator (158 aa)
 
     
  0.678
nadC
Nicotinate-nucleotide pyrophosphorylase (296 aa)
              0.665
gll3596
MarR family transcriptional regulator (222 aa)
         
  0.630
glr3591
Hypothetical protein (223 aa)
              0.621
glr2859
Oxidoreductase (333 aa)
              0.621
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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