STRINGSTRING
glr1104 protein (Gloeobacter violaceus) - STRING interaction network
"glr1104" - Beta-hydroxylase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1104Beta-hydroxylase (116 aa)    
Predicted Functional Partners:
glr1106
Beta-hydroxylase (121 aa)
 
          0.782
glr2817
Hydroxylase (185 aa)
   
          0.774
glr0165
Hypothetical protein (180 aa)
   
          0.772
gsr3810
Hypothetical protein (89 aa)
   
          0.542
gll1989
Hypothetical protein (333 aa)
   
          0.495
glr4340
Hypothetical protein (174 aa)
   
          0.457
glr1103
Hypothetical protein (328 aa)
              0.445
glr4430
Hypothetical protein (838 aa)
   
          0.426
gll3163
Hypothetical protein (307 aa)
   
          0.402
glr2966
Hypothetical protein (1083 aa)
   
          0.400
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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