STRINGSTRING
glr1143 protein (Gloeobacter violaceus) - STRING interaction network
"glr1143" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1143Hypothetical protein (634 aa)    
Predicted Functional Partners:
glr3987
Hypothetical protein (406 aa)
 
 
  0.800
gll2840
Hypothetical protein (410 aa)
 
 
  0.766
glr1272
Hypothetical protein (420 aa)
 
 
  0.756
glr1863
Hypothetical protein (657 aa)
 
 
  0.756
gll2308
Hypothetical protein; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (136 aa)
   
          0.756
gll0774
Hypothetical protein (446 aa)
 
 
  0.751
gll2309
Hypothetical protein (452 aa)
   
          0.727
gll0415
Hypothetical protein (616 aa)
   
     
  0.725
glr0638
Porin (586 aa)
   
     
  0.716
gll0494
Hypothetical protein (375 aa)
   
 
  0.716
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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