STRINGSTRING
glr1146 protein (Gloeobacter violaceus) - STRING interaction network
"glr1146" - Long-chain fatty-acid-CoA ligase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1146Long-chain fatty-acid-CoA ligase (503 aa)    
Predicted Functional Partners:
gll1941
Polyketide synthase (963 aa)
 
 
  0.849
gll1954
Polyketide synthase (2049 aa)
 
 
  0.837
glr0435
long-chain-fatty-acid-CoA ligase (502 aa)
   
   
 
0.817
gll1950
Long-chain fatty-acid-CoA ligase (532 aa)
   
   
 
0.806
glr1145
Hypothetical protein (461 aa)
              0.601
glr2850
Thioesterase (257 aa)
   
 
  0.598
gll1934
Thioesterase (262 aa)
 
 
  0.598
glr3048
Hypothetical protein (413 aa)
   
   
  0.545
gll1961
Hypothetical protein (150 aa)
 
     
  0.543
glr1144
Hypothetical protein (196 aa)
   
        0.537
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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