STRINGSTRING
glr1159 protein (Gloeobacter violaceus) - STRING interaction network
"glr1159" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1159Hypothetical protein (241 aa)    
Predicted Functional Partners:
glr1158
RNA polymerase sigma factor (226 aa)
 
 
      0.963
glr1160
Hypothetical protein (117 aa)
              0.829
gll1157
Crp/Fnr family transcriptional regulator (243 aa)
 
          0.694
gll4302
Hypothetical protein (335 aa)
   
          0.650
glr4050
Hypothetical protein (107 aa)
   
          0.641
glr1764
RNA polymerase sigma factor (197 aa)
 
 
      0.624
glr4357
RNA polymerase sigma factor (193 aa)
 
 
      0.616
gll0343
Ferrichrome-iron receptor (792 aa)
   
          0.560
gll0320
AraC family transcriptional regulator (323 aa)
   
          0.555
glr1161
Hypothetical protein (341 aa)
              0.547
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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