STRINGSTRING
glr1198 protein (Gloeobacter violaceus) - STRING interaction network
"glr1198" - Phosphodiesterase/alkaline phosphatase D in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1198Phosphodiesterase/alkaline phosphatase D (520 aa)    
Predicted Functional Partners:
folE
GTP cyclohydrolase I (214 aa)
       
    0.900
glr3579
Hypothetical protein (276 aa)
         
    0.900
glr1487
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin (117 aa)
         
    0.900
glr2446
Hypothetical protein (435 aa)
 
        0.616
glr2447
Hypothetical protein (230 aa)
 
        0.599
gll2099
Phytase (474 aa)
   
          0.546
gll0561
Hypothetical protein (699 aa)
 
        0.465
gll0567
Hypothetical protein (786 aa)
   
   
  0.432
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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