STRINGSTRING
glr1208 protein (Gloeobacter violaceus) - STRING interaction network
"glr1208" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1208Hypothetical protein (230 aa)    
Predicted Functional Partners:
glr1209
Hypothetical protein (579 aa)
              0.560
glr1207
Hypothetical protein (535 aa)
              0.558
gll3982
Hypothetical protein (104 aa)
   
          0.537
gsr2395
Hypothetical protein (78 aa)
   
          0.498
gsl2026
Hypothetical protein (80 aa)
   
          0.498
gll1696
Hypothetical protein (146 aa)
   
          0.470
gll0198
Bacterioopsin (298 aa)
   
          0.433
glr0712
Hypothetical protein (255 aa)
   
          0.430
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (269 aa)
              0.425
glr2618
Hypothetical protein (241 aa)
   
          0.415
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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