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glr1340 protein (Gloeobacter violaceus) - STRING interaction network
"glr1340" - LysR family transcriptional regulator in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1340LysR family transcriptional regulator (311 aa)    
Predicted Functional Partners:
glr1664
Hypothetical protein (122 aa)
   
          0.608
glr0782
Hypothetical protein (105 aa)
   
          0.572
glr1339
Hypothetical protein (259 aa)
              0.555
cbbL
Ribulose bisophosphate carboxylase; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site (474 aa)
         
  0.474
corA
Cation transporter; Mediates influx of magnesium ions (385 aa)
     
      0.467
gll1338
Biotin acetyl-CoA carboxylase ligase (258 aa)
   
   
  0.462
ccmM
Carbon dioxide concentrating mechanism protein (668 aa)
         
  0.455
rlmH
Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (151 aa)
              0.438
gll4162
Two-component response regulator (246 aa)
   
   
  0.428
glr2669
Two-component response regulator (245 aa)
   
   
  0.418
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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