STRINGSTRING
glr1356 protein (Gloeobacter violaceus) - STRING interaction network
"glr1356" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1356Hypothetical protein (315 aa)    
Predicted Functional Partners:
glr1357
Hypothetical protein (392 aa)
 
     
  0.991
gll2874
Hypothetical protein (507 aa)
 
     
  0.819
gll0394
Beta-carotene ketolase (573 aa)
 
     
  0.759
gll4056
Hypothetical protein (398 aa)
         
  0.747
pys
Phytoene synthase (317 aa)
          0.729
gll1923
Phytoene dehydrogenase (654 aa)
   
     
  0.699
gll3624
Hypothetical protein (111 aa)
   
          0.650
glr4405
Hypothetical protein (557 aa)
   
     
  0.642
gll1355
Hypothetical protein (278 aa)
              0.629
tsaD
DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (342 aa)
              0.629
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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