STRINGSTRING
glr1385 protein (Gloeobacter violaceus) - STRING interaction network
"glr1385" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1385Hypothetical protein (895 aa)    
Predicted Functional Partners:
glr2404
Hypothetical protein (256 aa)
 
 
  0.780
glr1610
Hypothetical protein (752 aa)
   
     
  0.777
glr1389
Hypothetical protein (232 aa)
 
 
  0.772
glr1815
Hypothetical protein (261 aa)
 
 
  0.764
glr1387
MotA/TolQ/ExbB family proton channel protein (211 aa)
 
   
  0.707
glr1387
Hypothetical protein (211 aa)
 
   
  0.707
glr0327
TonB-dependent receptor (842 aa)
   
          0.627
gll1141
tolQ-type transport protein (220 aa)
 
   
  0.623
glr1339
Hypothetical protein (259 aa)
   
        0.610
gll1978
Ferrichrome-iron receptor (719 aa)
   
          0.589
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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