STRINGSTRING
glr1423 protein (Gloeobacter violaceus) - STRING interaction network
"glr1423" - Oxidoreductase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1423Oxidoreductase (321 aa)    
Predicted Functional Partners:
glr1422
Hypothetical protein (292 aa)
              0.796
glr1421
Short-chain dehydrogenase (259 aa)
 
          0.758
gll1420
Transcriptional regulator (202 aa)
 
     
  0.615
glr3861
MarR family transcriptional regulator (158 aa)
   
     
  0.595
putA
1-pyrroline-5-carboxylate dehydrogenase (996 aa)
   
 
  0.579
gll2145
Malonyl CoA-ACP transacylase (295 aa)
   
 
  0.521
glr1439
Hypothetical protein (297 aa)
 
 
  0.481
glr0482
Hypothetical protein (290 aa)
 
 
  0.449
glr2066
Hypothetical protein (179 aa)
   
 
      0.442
glsF
Ferredoxin-dependent glutamate synthase (1534 aa)
         
  0.426
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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