STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1672ORF_ID:glr1672; unknown protein. (433 aa)    
Predicted Functional Partners:
glr2407
ORF_ID:glr2407; photomixotrophic growth related protein, PmgA homolog.
 
 
 0.959
gsr4179
ORF_ID:gsr4179; hypothetical protein.
 
 
 0.948
gll0068
ORF_ID:gll0068; hypothetical protein.
  
  
 0.808
gll0634
Two-component hybrid sensor and regulator; ORF_ID:gll0634.
 
  
 0.786
glr0776
5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine.
   
  
 0.760
gll2100
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil.
   
  
 0.760
glr3811
ORF_ID:glr3811; hypothetical protein.
  
    0.722
glr1673
ORF_ID:glr1673; hypothetical protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.675
gll4160
Two-component response regulator; ORF_ID:gll4160.
  
  
 0.667
glr1016
Two-component hybrid sensor and regulator; ORF_ID:glr1016.
 
  
 0.632
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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