STRINGSTRING
glr1801 protein (Gloeobacter violaceus) - STRING interaction network
"glr1801" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1801Hypothetical protein (186 aa)    
Predicted Functional Partners:
glr1802
Hypothetical protein (344 aa)
              0.859
gll1971
Hypothetical protein (166 aa)
   
          0.759
glr1800
Hypothetical protein (122 aa)
              0.634
glr1803
Hypothetical protein (513 aa)
              0.544
glr1861
DegT/DnrJ/EryC1/StrS family protein (382 aa)
 
   
  0.532
rps4
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (206 aa)
   
      0.511
gsr1799
Transcriptional regulator (74 aa)
              0.444
glsF
Ferredoxin-dependent glutamate synthase (1534 aa)
           
  0.418
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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