STRINGSTRING
glr1986 protein (Gloeobacter violaceus) - STRING interaction network
"glr1986" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1986Hypothetical protein (307 aa)    
Predicted Functional Partners:
glr1987
Hypothetical protein (163 aa)
              0.756
glr1988
Penicillin amidase (806 aa)
 
          0.699
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (433 aa)
     
      0.525
gll1396
Phosphatidate cytidylyltransferase (267 aa)
     
      0.508
glr1301
HlyB/MsbA family ABC transporter (595 aa)
     
      0.490
glr1300
HlyB/MsbA family ABC transporter (577 aa)
     
      0.490
glr1067
HlyB/MsbA family ABC transporter (605 aa)
     
      0.490
gll4135
HlyB/MsbA family ABC transporter (600 aa)
     
      0.490
gll3672
HlyB/MsbA family ABC transporter (578 aa)
     
      0.490
gll2868
HlyB/MsbA family ABC transporter (588 aa)
     
      0.490
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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