STRINGSTRING
glr2017 protein (Gloeobacter violaceus) - STRING interaction network
"glr2017" - ABC transporter permease in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr2017ABC transporter permease (373 aa)    
Predicted Functional Partners:
glr2015
ABC transporter ATP-binding component (637 aa)
  0.989
glr2014
Hypothetical protein (442 aa)
 
          0.969
glr2016
ABC transporter permease (366 aa)
 
       
0.900
gll2013
TetR family transcriptional regulatory protein (430 aa)
 
          0.804
glr3472
ABC transporter ATP-binding protein (313 aa)
  0.774
glr3421
ABC transporter ATP-binding protein (246 aa)
  0.767
glr3473
Hypothetical protein (403 aa)
   
          0.766
gll0675
Hypothetical protein (306 aa)
  0.760
glr2167
ABC transporter ATP-binding protein (335 aa)
  0.741
glr3104
ABC transporter ATP-binding protein (247 aa)
 
  0.706
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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