STRINGSTRING
glr2298 protein (Gloeobacter violaceus) - STRING interaction network
"glr2298" - Sugar-non-specific nuclease NucA-like protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr2298Sugar-non-specific nuclease NucA-like protein (347 aa)    
Predicted Functional Partners:
gll0714
Hypothetical protein (463 aa)
   
          0.708
glr1347
Hypothetical protein (485 aa)
   
          0.661
gll0642
Hypothetical protein (486 aa)
 
          0.661
glr0895
Hypothetical protein (526 aa)
   
          0.656
glr2297
Transketolase (670 aa)
   
        0.649
glr0892
Hypothetical protein (487 aa)
   
          0.636
rnz
Hypothetical protein; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (317 aa)
     
      0.625
glr0592
Hypothetical protein (471 aa)
   
          0.621
gll0641
Hypothetical protein (485 aa)
   
          0.615
gll0953
Hypothetical protein (387 aa)
   
          0.614
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (11%) [HD]