STRINGSTRING
glr2407 protein (Gloeobacter violaceus) - STRING interaction network
"glr2407" - Photomixotrophic growth related protein, PmgA-like protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr2407Photomixotrophic growth related protein, PmgA-like protein (144 aa)    
Predicted Functional Partners:
glr1672
Hypothetical protein (433 aa)
 
 
 
  0.872
glr2668
RNA polymerase sigma factor SigF (254 aa)
   
 
  0.816
pcp
Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline (205 aa)
              0.745
glr2408
DNA polymerase related protein (229 aa)
              0.745
glr2275
Hypothetical protein (382 aa)
   
          0.683
secG
Preprotein translocase subunit SecG (103 aa)
   
          0.671
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (480 aa)
              0.658
glr4288
Hypothetical protein (119 aa)
   
          0.593
gsl3751
Hypothetical protein (95 aa)
   
          0.573
glr1767
Two-component sensor histidine kinase (670 aa)
   
 
 
  0.531
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (8%) [HD]