STRINGSTRING
glr2547 protein (Gloeobacter violaceus) - STRING interaction network
"glr2547" - Interphotoreceptor retinoid-binding protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr2547Interphotoreceptor retinoid-binding protein (376 aa)    
Predicted Functional Partners:
glr1537
Hypothetical protein (356 aa)
   
          0.709
glr2247
Hypothetical protein (453 aa)
   
          0.682
ho1
Heme oxygenase (238 aa)
   
          0.644
glr2548
Hypothetical protein (604 aa)
              0.638
glr3167
Hypothetical protein (319 aa)
   
          0.612
glr0955
Hypothetical protein (225 aa)
   
          0.594
bvdR
Biliverdin reductase (332 aa)
   
          0.557
glr1639
Hypothetical protein (156 aa)
   
          0.525
cobJ
Precorrin methylase (588 aa)
              0.514
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (198 aa)
   
          0.446
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (8%) [HD]