STRINGSTRING
glr2574 protein (Gloeobacter violaceus) - STRING interaction network
"glr2574" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr2574Hypothetical protein (152 aa)    
Predicted Functional Partners:
glr1481
Hypothetical protein (147 aa)
   
          0.778
gll0550
Hypothetical protein (142 aa)
   
          0.778
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (400 aa)
              0.721
glr2573
Hypothetical protein (781 aa)
              0.721
glr0136
Hypothetical protein (213 aa)
   
          0.567
gll2958
Hypothetical protein (223 aa)
   
          0.554
glr3975
Hypothetical protein (204 aa)
   
          0.544
glr0936
Hypothetical protein (216 aa)
   
          0.539
gll1378
Hypothetical protein (211 aa)
   
          0.536
glr0602
Hypothetical protein (214 aa)
   
          0.532
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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