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glr2600 protein (Gloeobacter violaceus) - STRING interaction network
"glr2600" - Aspartate aminotransferase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr2600Aspartate aminotransferase (395 aa)    
Predicted Functional Partners:
gll0524
Prephenate dehydratase (277 aa)
 
 
  0.972
tyrA
Arogenate dehydrogenase (277 aa)
       
  0.945
ldh
L-lactate dehydrogenase A chain (330 aa)
   
 
  0.937
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (325 aa)
   
 
  0.937
gll0765
Cysteine synthase (320 aa)
   
 
  0.930
cysK
Cysteine synthase (320 aa)
   
 
  0.925
glr3091
4-hydroxyphenylpyruvate dioxygenase (344 aa)
     
 
  0.924
gll1774
Aspartate kinase (601 aa)
   
  0.923
gdhA
Glutamate dehydrogenase (458 aa)
   
 
  0.923
putA
1-pyrroline-5-carboxylate dehydrogenase (996 aa)
   
 
  0.920
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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