STRINGSTRING
glr2813 protein (Gloeobacter violaceus) - STRING interaction network
"glr2813" - Protease in Gloeobacter violaceus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr2813Protease (183 aa)    
Predicted Functional Partners:
glr2155
AhpC/TSA family protein (212 aa)
   
 
  0.577
gll3158
Peroxiredoxin (184 aa)
   
 
  0.577
gll0506
Bacterioferritin comigratory protein (148 aa)
   
 
  0.577
fus
Elongation factor G (670 aa)
   
      0.567
rpl2
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (280 aa)
     
      0.516
glsF
Ferredoxin-dependent glutamate synthase (1534 aa)
     
      0.502
rps8
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (133 aa)
   
 
      0.493
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (551 aa)
     
   
  0.486
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (247 aa)
     
      0.483
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (104 aa)
     
      0.475
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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