STRINGSTRING
glr2878 protein (Gloeobacter violaceus) - STRING interaction network
"glr2878" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr2878Hypothetical protein (342 aa)    
Predicted Functional Partners:
glr2879
Hypothetical protein (234 aa)
              0.859
gsl2877
Hypothetical protein (85 aa)
   
        0.649
cry
Cryptochrome; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity) (500 aa)
   
   
  0.474
glr0784
DNA photolyase (479 aa)
   
   
  0.474
gsl3722
Transposase (97 aa)
   
          0.412
glr1749
Photolyase (490 aa)
   
   
  0.408
glr2921
Hypothetical protein (221 aa)
   
          0.400
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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