STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr3041ORF_ID:glr3041; unknown protein. (330 aa)    
Predicted Functional Partners:
gll1094
ORF_ID:gll1094; probable 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit.
  
 0.911
glr1705
ORF_ID:glr1705; unknown protein.
   
 0.740
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.715
glr3530
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.
   
 0.638
gll3040
ORF_ID:gll3040; hypothetical protein.
       0.565
glr4164
Putative gluconeogenesis factor; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
   
  
 0.451
glr2574
ORF_ID:glr2574; hypothetical protein.
  
 
 
 0.420
glr0003
ORF_ID:glr0003; probable channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.407
gll0367
Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.407
glr1162
ORF_ID:glr1162; pore-forming membrane protein SmpX homolog; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.407
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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