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glr3090 protein (Gloeobacter violaceus) - STRING interaction network
"glr3090" - Gamma-tocopherol methyltransferase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr3090Gamma-tocopherol methyltransferase (281 aa)    
Predicted Functional Partners:
glr3089
Hypothetical protein (363 aa)
 
 
  0.992
gll0283
Tocopherol phytyltransferase (298 aa)
 
 
  0.940
glr3091
4-hydroxyphenylpyruvate dioxygenase (344 aa)
   
   
  0.866
shc
Squalene-hopene cyclase (637 aa)
     
 
  0.699
gsr3092
Hypothetical protein (44 aa)
              0.697
gll3515
Hypothetical protein (272 aa)
   
          0.647
pys
Phytoene synthase (317 aa)
     
 
  0.631
glr4058
Farnesyl-diphosphate farnesyltransferase (363 aa)
     
 
  0.631
glr1296
Hypothetical protein (280 aa)
   
          0.584
icd
Isocitrate dehydrogenase (359 aa)
              0.574
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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