STRINGSTRING
glr3106 protein (Gloeobacter violaceus) - STRING interaction network
"glr3106" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr3106Hypothetical protein (481 aa)    
Predicted Functional Partners:
glr3104
ABC transporter ATP-binding protein (247 aa)
 
          0.973
glr3105
Hypothetical protein (471 aa)
 
       
0.934
gll1303
Hypothetical protein (472 aa)
 
          0.852
gll0020
Hypothetical protein (456 aa)
   
          0.687
gll0019
Hypothetical protein (460 aa)
   
          0.685
gll3103
Hypothetical protein (773 aa)
              0.665
gll0021
HlyB/MsbA family ABC transporter (605 aa)
   
          0.608
gll2291
Hypothetical protein (398 aa)
   
          0.542
glr2075
Hypothetical protein (255 aa)
   
          0.458
glr4218
Hypothetical protein (414 aa)
   
          0.455
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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