Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gll0635 | gll3122 | gene:10758110 | gene:10760628 | Two-component hybrid sensor and regulator; ORF_ID:gll0635. | Two-component hybrid sensor and regulator; ORF_ID:gll3122. | 0.988 |
gll0635 | glr3124 | gene:10758110 | gene:10760630 | Two-component hybrid sensor and regulator; ORF_ID:gll0635. | ORF_ID:glr3124; hypothetical protein. | 0.430 |
gll3122 | gll0635 | gene:10760628 | gene:10758110 | Two-component hybrid sensor and regulator; ORF_ID:gll3122. | Two-component hybrid sensor and regulator; ORF_ID:gll0635. | 0.988 |
gll3122 | gll3123 | gene:10760628 | gene:10760629 | Two-component hybrid sensor and regulator; ORF_ID:gll3122. | ORF_ID:gll3123. | 0.492 |
gll3122 | glr3124 | gene:10760628 | gene:10760630 | Two-component hybrid sensor and regulator; ORF_ID:gll3122. | ORF_ID:glr3124; hypothetical protein. | 0.403 |
gll3123 | gll3122 | gene:10760629 | gene:10760628 | ORF_ID:gll3123. | Two-component hybrid sensor and regulator; ORF_ID:gll3122. | 0.492 |
gll3123 | glr3124 | gene:10760629 | gene:10760630 | ORF_ID:gll3123. | ORF_ID:glr3124; hypothetical protein. | 0.551 |
gll3123 | glr3125 | gene:10760629 | gene:10760631 | ORF_ID:gll3123. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.426 |
glr3124 | gll0635 | gene:10760630 | gene:10758110 | ORF_ID:glr3124; hypothetical protein. | Two-component hybrid sensor and regulator; ORF_ID:gll0635. | 0.430 |
glr3124 | gll3122 | gene:10760630 | gene:10760628 | ORF_ID:glr3124; hypothetical protein. | Two-component hybrid sensor and regulator; ORF_ID:gll3122. | 0.403 |
glr3124 | gll3123 | gene:10760630 | gene:10760629 | ORF_ID:glr3124; hypothetical protein. | ORF_ID:gll3123. | 0.551 |
glr3124 | glr3125 | gene:10760630 | gene:10760631 | ORF_ID:glr3124; hypothetical protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.526 |
glr3125 | gll3123 | gene:10760631 | gene:10760629 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | ORF_ID:gll3123. | 0.426 |
glr3125 | glr3124 | gene:10760631 | gene:10760630 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | ORF_ID:glr3124; hypothetical protein. | 0.526 |