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glr3421 protein (Gloeobacter violaceus) - STRING interaction network
"glr3421" - ABC transporter ATP-binding protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr3421ABC transporter ATP-binding protein (246 aa)    
Predicted Functional Partners:
glr3422
Hypothetical protein (514 aa)
              0.877
glr2017
ABC transporter permease (373 aa)
  0.767
glr2016
ABC transporter permease (366 aa)
  0.765
ycf38
Hypothetical protein (294 aa)
   
  0.682
gll0674
Hypothetical protein (263 aa)
   
  0.682
tsaD
DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (342 aa)
   
 
      0.675
glr3420
Hypothetical protein (103 aa)
              0.662
gll2872
Hypothetical protein (259 aa)
   
   
  0.522
glr2649
Cell division protein FtsH-like protein (785 aa)
 
      0.493
glr3777
Oxidoreductase (245 aa)
 
 
 
  0.491
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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