STRINGSTRING
glr3448 protein (Gloeobacter violaceus) - STRING interaction network
"glr3448" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr3448Hypothetical protein (259 aa)    
Predicted Functional Partners:
glr3443
Hypothetical protein (262 aa)
 
     
  0.949
glr3442
ABC transporter ATP-binding protein (328 aa)
 
     
  0.949
glr3449
Hypothetical protein (165 aa)
              0.712
glr3755
Hypothetical protein (231 aa)
   
          0.694
gll3447
Hypothetical protein (795 aa)
              0.653
gll1131
Hypothetical protein (183 aa)
   
          0.559
rpmF
50S ribosomal protein L32 (61 aa)
   
          0.548
glr0712
Hypothetical protein (255 aa)
   
          0.537
gsl3135
Hypothetical protein (71 aa)
   
          0.506
glr3390
Hypothetical protein (139 aa)
   
          0.502
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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