STRINGSTRING
glr3935 protein (Gloeobacter violaceus) - STRING interaction network
"glr3935" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr3935Hypothetical protein (274 aa)    
Predicted Functional Partners:
gll0259
Hypothetical protein (184 aa)
   
          0.778
cpcF
Phycocyanobilin lyase alpha subunit (193 aa)
   
          0.764
apcC
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (69 aa)
   
          0.753
glr4199
Hypothetical protein (445 aa)
   
          0.749
cupA
Hypothetical protein (436 aa)
   
          0.743
apcA
Allophycocyanin alpha subunit (161 aa)
   
          0.731
glr0738
Hypothetical protein (197 aa)
   
          0.730
apcD
allophycocyanin-B (161 aa)
   
          0.719
gll3219
Phycocyanin-associated rod linker protein (219 aa)
   
          0.709
glr0950
Phycocyanin-associated rod linker protein (219 aa)
   
          0.703
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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