STRINGSTRING
glr3940 protein (Gloeobacter violaceus) - STRING interaction network
"glr3940" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr3940Hypothetical protein (228 aa)    
Predicted Functional Partners:
crcB
Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity (125 aa)
     
      0.671
glr4165
Hypothetical protein (148 aa)
   
          0.659
gll3939
Hypothetical protein (223 aa)
              0.637
chlM
Mg-protoporphyrin IX methyl transferase (240 aa)
 
        0.604
ribA
Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (572 aa)
   
        0.578
glr3452
Hypothetical protein (598 aa)
 
          0.541
gll3548
Ribulose-phosphate 3-epimerase (233 aa)
   
   
  0.514
gll0941
Hypothetical protein (320 aa)
   
          0.482
polA
DNA polymerase I (938 aa)
   
   
  0.479
gll3938
Hypothetical protein (343 aa)
              0.469
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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