STRINGSTRING
glr3944 protein (Gloeobacter violaceus) - STRING interaction network
"glr3944" - Transposase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr3944Transposase (175 aa)    
Predicted Functional Partners:
glr3449
Hypothetical protein (165 aa)
   
          0.725
glr0172
Transposase (371 aa)
   
          0.691
gll3943
Oxidoreductase (234 aa)
 
          0.689
gll2412
Hypothetical protein (537 aa)
   
          0.642
gll1214
Hypothetical protein (365 aa)
   
          0.627
gll4350
Hypothetical protein (165 aa)
   
          0.591
gll1515
Hypothetical protein (201 aa)
   
          0.568
gll1808
Hypothetical protein (470 aa)
   
          0.566
glr0592
Hypothetical protein (471 aa)
   
          0.556
gsl4024
Hypothetical protein (81 aa)
   
          0.549
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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