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glr4058 protein (Gloeobacter violaceus) - STRING interaction network
"glr4058" - Farnesyl-diphosphate farnesyltransferase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr4058Farnesyl-diphosphate farnesyltransferase (363 aa)    
Predicted Functional Partners:
shc
Squalene-hopene cyclase (637 aa)
 
 
  0.992
crtE
Geranylgeranyl pyrophosphate synthase (295 aa)
   
  0.932
glr1460
Hypothetical protein (292 aa)
 
 
    0.906
gll2384
Hypothetical protein (396 aa)
     
 
    0.897
gsl3932
Hypothetical protein (99 aa)
   
 
    0.892
glr3257
Hypothetical protein (322 aa)
   
 
    0.892
glr2279
Hypothetical protein (291 aa)
   
 
    0.892
gll3635
Oxidoreductase (298 aa)
   
 
    0.892
gll3484
Hypothetical protein (228 aa)
   
 
    0.892
gll2891
Hypothetical protein (284 aa)
   
 
    0.892
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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