STRINGSTRING
glr4065 protein (Gloeobacter violaceus) - STRING interaction network
"glr4065" - Transposase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr4065Transposase (254 aa)    
Predicted Functional Partners:
gsl3856
Transposase (83 aa)
 
          0.823
gll4066
Transposase (253 aa)
   
          0.527
gll4067
Transposase (247 aa)
   
          0.509
gll4068
Transposase (261 aa)
   
          0.488
gll0151
Transposase (522 aa)
   
          0.430
gll3836
Hypothetical protein (522 aa)
   
          0.430
gll2984
Transposase (522 aa)
   
          0.430
gll0606
Transposase (522 aa)
   
          0.430
gll0151
Transposase (522 aa)
   
          0.430
gll1512
Hypothetical protein (227 aa)
   
          0.424
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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