STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr4072ORF_ID:glr4072; probable serine/threonine kinase. (946 aa)    
Predicted Functional Partners:
gll1405
ORF_ID:gll1405; hypothetical protein.
 
 
 0.857
gll2757
ORF_ID:gll2757; hypothetical protein.
 
 
 0.857
gll0158
ORF_ID:gll0158; hypothetical protein.
 
 
 0.856
gll4071
ORF_ID:gll4071; hypothetical protein.
 
 
   0.818
glr4017
ORF_ID:glr4017; similar to serine/threonine kinase.
  
    0.775
rpoB
RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.654
glr1090
ORF_ID:glr1090; hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
   0.634
htpG
Heat shock protein; Molecular chaperone. Has ATPase activity.
  
 0.565
gll0635
Two-component hybrid sensor and regulator; ORF_ID:gll0635.
  
 
 0.560
gll1662
ORF_ID:gll1662; similar to two-component sensor histidine kinase.
   
 
 0.523
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.