STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr4107Serine/threonine kinase; ORF_ID:glr4107. (290 aa)    
Predicted Functional Partners:
glr0906
WD-repeat protein; ORF_ID:glr0906.
 
 
    0.877
gll0158
ORF_ID:gll0158; hypothetical protein.
 
 
 0.828
gll1405
ORF_ID:gll1405; hypothetical protein.
 
 
 0.828
gll2757
ORF_ID:gll2757; hypothetical protein.
 
 
 0.828
glr4108
LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. Can also use m-DAP instead of LL-DAP as the amino- group donor.
       0.634
glr4109
ORF_ID:glr4109; hypothetical protein.
       0.562
glr1350
ORF_ID:glr1350; hypothetical protein.
  
 
   0.468
gsr4106
ORF_ID:gsr4106; unknown protein.
       0.467
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.