STRINGSTRING
glr4110 protein (Gloeobacter violaceus) - STRING interaction network
"glr4110" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr4110Hypothetical protein (341 aa)    
Predicted Functional Partners:
glr0745
Hypothetical protein (347 aa)
   
          0.775
glr0223
Hypothetical protein (340 aa)
   
          0.581
glr2921
Hypothetical protein (221 aa)
   
          0.570
rbcX
Hypothetical protein (125 aa)
   
          0.557
gll1739
RNA polymerase sigma factor RpoE (214 aa)
   
          0.540
glr4109
Hypothetical protein (209 aa)
              0.532
glr0404
Hypothetical protein (640 aa)
 
          0.521
glr2159
Hypothetical protein (355 aa)
   
          0.511
gll0650
UDP-N-acetyl-D-mannosaminuronic acid transferase (241 aa)
   
          0.494
dapL
LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli. Can also use m-DAP instead of LL-DAP as the amino-group donor (392 aa)
              0.479
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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