STRINGSTRING
glr4206 protein (Gloeobacter violaceus) - STRING interaction network
"glr4206" - Endopeptidase IV in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr4206Endopeptidase IV (632 aa)    
Predicted Functional Partners:
glr4207
Hypothetical protein (111 aa)
              0.674
gsl4205
Hypothetical protein (85 aa)
              0.645
polA
DNA polymerase I (938 aa)
   
   
  0.632
panC/cmk
Bifunctional pantoate ligase/cytidylate kinase (515 aa)
              0.585
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 (328 aa)
 
          0.511
cysK
Cysteine synthase (320 aa)
     
      0.482
gll0765
Cysteine synthase (320 aa)
     
      0.482
gsr4208
Hypothetical protein (89 aa)
              0.478
glyS
glycyl-tRNA synthetase subunit beta (724 aa)
 
        0.472
gll1141
tolQ-type transport protein (220 aa)
   
          0.448
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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