STRINGSTRING
glr4289 protein (Gloeobacter violaceus) - STRING interaction network
"glr4289" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr4289Hypothetical protein (504 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (376 aa)
   
  0.933
glr4290
Hypothetical protein (125 aa)
 
     
  0.927
glr4288
Hypothetical protein (119 aa)
 
     
  0.914
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity (614 aa)
     
    0.908
gll1619
Histone deacetylase family protein (303 aa)
   
    0.906
gll1275
Histone deacetylase family protein (307 aa)
   
    0.906
gll1432
DNA polymerase III subunit delta’ (308 aa)
     
  0.897
glr3093
Hypothetical protein (125 aa)
 
     
  0.792
glr2720
HlyB/MsbA family ABC transporter (583 aa)
       
    0.768
glr2719
HlyB/MsbA family ABC transporter (595 aa)
       
    0.768
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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