STRINGSTRING
gll0151 protein (Gloeobacter violaceus) - STRING interaction network
"gll0151" - Transposase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0151Transposase (522 aa)    
Predicted Functional Partners:
gll3737
Hypothetical protein (136 aa)
   
          0.645
gll4321
Hypothetical protein (260 aa)
              0.636
gsl1945
Hypothetical protein (95 aa)
   
          0.609
glr3485
Hypothetical protein (310 aa)
   
          0.578
gsl1943
Hypothetical protein (91 aa)
   
          0.516
gll3552
Hypothetical protein (113 aa)
   
          0.493
gll0336
Hypothetical protein (511 aa)
   
          0.479
gll1512
Hypothetical protein (227 aa)
   
          0.469
glr3858
Transposase (100 aa)
   
          0.448
gll2422
Hypothetical protein (155 aa)
   
          0.447
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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