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glr4357 protein (Gloeobacter violaceus) - STRING interaction network
"glr4357" - RNA polymerase sigma factor in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr4357RNA polymerase sigma factor (193 aa)    
Predicted Functional Partners:
gll1739
RNA polymerase sigma factor RpoE (214 aa)
   
     
  0.822
glr3584
RNA polymerase sigma factor (187 aa)
   
     
  0.814
glr1159
Hypothetical protein (241 aa)
 
 
      0.616
hemB
Delta-aminolevulinic acid dehydratase (327 aa)
              0.600
rpoC2
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1262 aa)
       
 
  0.499
rpoC1
DNA-directed RNA polymerase subunit gamma; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (608 aa)
       
 
  0.499
gll0554
tRNA/rRNA methyltransferase (265 aa)
 
          0.474
glr0922
Nitrogen assimilation regulatory protein (845 aa)
     
   
  0.415
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (530 aa)
         
  0.411
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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