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glr4400 protein (Gloeobacter violaceus) - STRING interaction network
"glr4400" - Rod shape-determining protein MreC in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr4400Rod shape-determining protein MreC (412 aa)    
Predicted Functional Partners:
glr4399
Rod shape-determining protein MreB (348 aa)
 
 
  0.995
glr4401
Hypothetical protein (174 aa)
 
 
  0.981
glr1467
Rod shape-determining protein MreB (343 aa)
 
 
  0.973
gll2229
Rod shape-determining protein MreB (343 aa)
 
 
  0.955
glr4398
Hypothetical protein (262 aa)
 
 
  0.930
chlM
Mg-protoporphyrin IX methyl transferase (240 aa)
              0.859
gll3425
Penicillin-binding protein (615 aa)
 
   
  0.833
glr1486
Rod-shape-determining protein MrdB-like protein (418 aa)
 
 
  0.831
glr4397
Hypothetical protein (248 aa)
   
        0.659
glr3536
Hypothetical protein (839 aa)
   
        0.643
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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