STRINGSTRING
gsl1716 protein (Gloeobacter violaceus) - STRING interaction network
"gsl1716" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsl1716Hypothetical protein (89 aa)    
Predicted Functional Partners:
glr2371
Hypothetical protein (123 aa)
   
          0.734
gsl2882
Hypothetical protein (66 aa)
   
          0.732
gll4186
Hypothetical protein (129 aa)
   
          0.726
gll2881
Hypothetical protein (128 aa)
   
          0.725
gll0064
Hypothetical protein (143 aa)
   
          0.709
gsr0474
Hypothetical protein (91 aa)
   
          0.670
glr1717
Anthranilate synthase component I (508 aa)
              0.658
gll2880
Hypothetical protein (144 aa)
   
          0.657
trxA
Thiol-disulfide interchange protein (179 aa)
              0.652
ycf34
Hypothetical protein (80 aa)
   
          0.649
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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