STRINGSTRING
gsl2637 protein (Gloeobacter violaceus) - STRING interaction network
"gsl2637" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsl2637Hypothetical protein (89 aa)    
Predicted Functional Partners:
rpsP
30S ribosomal protein S16 (89 aa)
   
        0.880
ffh
Signal recognition particle protein SRP54; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY (497 aa)
              0.739
glr4177
Hypothetical protein (110 aa)
   
          0.725
rpsU2
30S ribosomal protein S21 (57 aa)
              0.710
glr3382
Hypothetical protein (375 aa)
   
          0.692
gsl1241
Hypothetical protein (67 aa)
   
          0.663
rne
Ribonuclease E (662 aa)
   
 
      0.635
gll2872
Hypothetical protein (259 aa)
   
          0.633
glr3093
Hypothetical protein (125 aa)
   
          0.632
gll4416
Hypothetical protein (178 aa)
   
          0.629
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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