STRINGSTRING
gsl3135 protein (Gloeobacter violaceus) - STRING interaction network
"gsl3135" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsl3135Hypothetical protein (71 aa)    
Predicted Functional Partners:
gll3134
Hypothetical protein (457 aa)
              0.859
secE
Preprotein translocase subunit (73 aa)
   
          0.778
psbN
Photosystem II reaction center protein N; May play a role in photosystem I and II biogenesis (43 aa)
   
          0.756
glr2485
Hypothetical protein (141 aa)
   
          0.749
gll3803
Hypothetical protein (215 aa)
   
          0.737
glr0772
Hypothetical protein (233 aa)
   
          0.734
glr0104
Hypothetical protein (131 aa)
   
          0.723
glr0028
Hypothetical protein (152 aa)
   
          0.722
gll3213
Hypothetical protein (184 aa)
   
          0.722
gll1240
Hypothetical protein (121 aa)
   
          0.716
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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