STRINGSTRING
gsl3722 protein (Gloeobacter violaceus) - STRING interaction network
"gsl3722" - Transposase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsl3722Transposase (97 aa)    
Predicted Functional Partners:
gll3721
Glucosyltransferase (255 aa)
              0.859
gll3720
Hypothetical protein (144 aa)
              0.829
gll3719
UDP-glucose dehydrogenase (462 aa)
              0.643
gsl1627
Transposase (97 aa)
   
          0.641
gll3718
Glucosyltransferase (352 aa)
              0.578
gsr3253
Transposase (63 aa)
   
          0.516
gll3717
Hypothetical protein (323 aa)
              0.468
gll3723
Hypothetical protein (178 aa)
              0.462
gll3716
Hypothetical protein (683 aa)
              0.452
gll3715
Hypothetical protein (453 aa)
              0.452
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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