STRINGSTRING
gsl3760 protein (Gloeobacter violaceus) - STRING interaction network
"gsl3760" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsl3760Hypothetical protein (80 aa)    
Predicted Functional Partners:
gll2428
Hypothetical protein (120 aa)
   
          0.699
gll3761
Carboxylesterase (214 aa)
         
  0.604
glr0686
Hypothetical protein (122 aa)
   
          0.582
gll1202
Hypothetical protein (118 aa)
   
          0.555
glr1478
Hypothetical protein (142 aa)
 
          0.548
gll3762
RNA polymerase sigma factor SigC; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (362 aa)
              0.473
gll1725
Hypothetical protein (120 aa)
   
          0.473
ycf41
Hypothetical protein (150 aa)
   
          0.435
glr1757
Hypothetical protein (256 aa)
   
          0.404
glr4173
Hypothetical protein (323 aa)
   
          0.401
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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