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gsl4025 protein (Gloeobacter violaceus) - STRING interaction network
"gsl4025" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsl4025Hypothetical protein (98 aa)    
Predicted Functional Partners:
glr1876
Hypothetical protein (104 aa)
   
  0.972
glr4287
Hypothetical protein (272 aa)
   
        0.885
gll1742
Hypothetical protein (202 aa)
   
        0.876
glr2792
Hypothetical protein (225 aa)
   
        0.868
rpsO
30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA (89 aa)
              0.859
psaF
Photosystem I subunit III; Probably participates in efficiency of electron transfer from plastocyanin to P700 (or cytochrome c553 in algae and cyanobacteria). This plastocyanin-docking protein contributes to the specific association of plastocyanin with PSI (181 aa)
   
        0.793
thf1
Thf1-like protein; May be involved in photosynthetic membrane biogenesis (228 aa)
   
        0.789
psaL
Photosystem I reaction center protein subunit XI (147 aa)
   
        0.787
gll4313
Hypothetical protein (210 aa)
   
        0.785
glr2112
Hypothetical protein (289 aa)
   
        0.784
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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