STRINGSTRING
gsl4116 protein (Gloeobacter violaceus) - STRING interaction network
"gsl4116" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsl4116Hypothetical protein (82 aa)    
Predicted Functional Partners:
gsl4117
Hypothetical protein (80 aa)
 
 
  0.985
gsr3999
Hypothetical protein (88 aa)
 
 
  0.953
gsr3504
Hypothetical protein (88 aa)
 
          0.820
gsr2534
Hypothetical protein (91 aa)
 
          0.807
gsl0168
Hypothetical protein (91 aa)
   
 
  0.771
gsr4118
Hypothetical protein (82 aa)
              0.545
gsr3527
Hypothetical protein (80 aa)
     
      0.485
gsr2076
Hypothetical protein (90 aa)
     
      0.485
glr4239
Hypothetical protein (126 aa)
     
      0.485
rnz
Hypothetical protein; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (317 aa)
              0.476
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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