STRINGSTRING
gsr0488 protein (Gloeobacter violaceus) - STRING interaction network
"gsr0488" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsr0488Hypothetical protein (65 aa)    
Predicted Functional Partners:
gll2508
Hypothetical protein (437 aa)
   
  0.954
gll2325
ATP-dependent RNA helicase (384 aa)
   
  0.954
glr4264
Molecular chaperone DnaK; Acts as a chaperone (638 aa)
       
  0.934
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (314 aa)
     
  0.914
gll1676
Molecular chaperone DnaK (525 aa)
       
  0.910
gll3802
Hypothetical protein (511 aa)
       
  0.910
glr2925
RNA-binding protein (195 aa)
   
    0.905
gll2530
RNA-binding protein (123 aa)
   
    0.905
gll2326
RNA-binding protein (101 aa)
   
    0.905
gll1391
RNA-binding protein (122 aa)
   
    0.905
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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