STRINGSTRING
gsr2395 protein (Gloeobacter violaceus) - STRING interaction network
"gsr2395" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsr2395Hypothetical protein (78 aa)    
Predicted Functional Partners:
glr2396
Hypothetical protein (110 aa)
 
 
 
  0.980
gll3982
Hypothetical protein (104 aa)
   
          0.766
glr2394
ATP-dependent DNA helicase (793 aa)
              0.700
murF
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (450 aa)
              0.646
glr2397
Molecular chaperone DnaJ (228 aa)
              0.646
gsl2445
Hypothetical protein (85 aa)
   
          0.587
glr2399
Hypothetical protein (341 aa)
              0.584
gll1696
Hypothetical protein (146 aa)
 
          0.541
gll2393
Hypothetical protein (113 aa)
              0.540
glr1208
Hypothetical protein (230 aa)
   
          0.498
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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